Prostate cancer is often detected initially by a rise in serum prostate specific antigen (PSA) and since PSA was recommended for screening by the FDA in 1994 the incidence of prostate cancer has increased dramatically (2).. Although the front line treatments for prostate cancer (which include radical prostatectomy, radiation and androgen deprivation therapy) are initially effective, they are also associated with significant side effects. These side effects include urinary incontinence, erectile dysfunction and bowel dysfunction and they can impact negatively on the patient’s quality of life.
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So, for a disease that in most cases is not threatening to a man’s natural lifespan, the decision on how best to manage it should be made with careful consideration of the lasting impact of treatment on the patient's daily life. It is now increasingly clear that active surveillance is a viable option for many men who are diagnosed with prostate cancer (5–7). This non-invasive alternative to treatment is recommended for men with organ confined non-aggressive prostate cancer although international recommendations (AUA, EAU) vary in both eligibility criteria and follow up modalities (6). Although many studies have reported that active surveillance is as effective as conventional treatment for the management of indolent prostate cancer, many physicians and patients are reluctant to opt for this strategy (5). It has been suggested that this is, in part, due to a lack of suitable tools for the diagnosis and routine monitoring of the disease - tools that give a reliable indication of the likely clinical outcome (6).
Despite its perceived utility as a biomarker for prostate cancer, PSA measurements fail to provide sufficient evidence of the severity or potential aggressiveness of prostate cancer and it is therefore not well suited to supporting the early treatment decisions outlined above. There are a number of other clinical ‘tools’ available to help stratify patients based on their presumed degree of risk for developing aggressive Prostate cancer – most notably the Gleason scoring system (8). This system relies on the pathological scoring of patient biopsy samples and is limited to some extent by known sampling errors and challenges in the assessment of tissue pathology. Effective management of Prostate cancer patient treatment decisions would benefit greatly from the availability of specific molecular biomarkers. A number of novel tissue gene-based tests have been developed and are available. However, these suffer from the same limitations as the Gleason scoring system as they also rely on access to and interpretation of tissue samples.
For the compelling reasons outlined above, there has been significant recent interest in the development of novel protein biomarkers. The process of discovering and developing new protein biomarkers is often conducted in stages (13) and requires technologies that will allow for fast and consistent identification of proteins spanning the expansive dynamic range of the proteome. The selection of an appropriate sample material for which to base initial discovery experiments are influenced by considerations that are outlined in this review.
Proteome scale technologies have improved significantly in recent years and despite limitations, mass spectrometry has emerged as a key enabling technology for biomarker discovery such that it is now possible to use it to simultaneously identify and quantify thousands of proteins in biological samples. Strategies for evaluating the performance of candidate biomarkers, which previously relied on antibody-based approaches such as ELISA, now include a range of nano- and aptamer-based technologies that make it possible to undertake multiplexed measurement of low abundance proteins in biological fluids. At the same time a range of 'targeted' mass spectrometry methods can now be used for candidate biomarker evaluation.
It should go without saying that pre-analytical sample processing, MRM-assay assay development and post-analytical data handling must be undertaken in a manner that meets the requirements for clinical use - potentially across multiple laboratory sites. So, it is evident that new tests are needed in prostatecancer and developing them to the stage that they can be introduced in the clinical setting i.e. are 'fit for purpose', will require the combined and integrated effort of a range of discrete domain experts including those with knowledge and practical experience of hospital laboratory clinical chemistry.
Figure 1: Discovery and Clinical Implementationof Protein Biomarkers: outline of the process involved in bringing candidate protein biomarkers through from the discovery phase, evaluation and ultimately to adoption as a clinical assay for subsequent validation (Figure adapted from Rifai et al, 2006 (13).
Written by: Claire L. Tonry, Emma Leacy and Stephen R. Pennington
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